Curve3D (v1.0) :
Curve3D is a graphic program which allows the visualisation
of 3D surfaces. The displayed surface may be rotated, translated, zoomed,
z-clipped. Display in the form of grid, polygons; colors management ( simulated
lighting, color proportionnal to z or code value );Postscript output.
The program has been compiled for the following platforms :
Tensor (v2.0) :
Tensor Version 2.0 :
the latest version of our program for treating solution state 15N relaxation
for the study of molecular dynamics.
Originally devised for the study of rotational diffusion of macromolecules
the program now allows for the determination of internal mobility parameters
using the model-free approach from Lipari and Szabo, either in the case
of isotropic or anisotropic overall molecular diffusion.
A graphical display of internal mobility parameters and a rigorous
monte carlo analysis of errors and model suitability have been incorporated
into the program.
All of the already existant rotational diffusion analysis has been
retained, with a number of improvements in the user-interface and graphical
display. (
On-line Documentation
).
The program has been compiled for the following platforms :
The license is free for academic sites and non commercial use : Download Tensor.
Industrials or commercial users
should contact the Tensor Team ( tensor@ibs.fr
) to
obtain a license .
Module (v1.0) :
Module Version 1.0 :
Module is a novel program developed to allow the determination of alignment tensor parameters for individual or multiple domains in macromolecules from residual dipolar couplings and to facilitate their manipulation to construct low-resolution models of macromolecular structure.
For multi-domain systems the program determines the relative orientation of individual structured domains, and provides graphical user-driven rigid-body modeling of the different modules relative to the common tensorial frame.
Translational freedom in the common frame, and equivalent rotations
about the diagonalized (x,y,z) axes, are used to position the different
modules in the common frame to find a model in best agreement with experimentally
measured couplings alone or in combination with additional experimental
or covalent information. (
On-line
Documentation ).
The program has been compiled for the following platforms :
The license is free for academic sites and non commercial use : Download Module
Industrials or commercial users
should contact the Development Team ( module@ibs.fr
) to
obtain a license .
RELOAD(v1.0) :
RELOADVersion 1.0 :
RELOAD is a program developped to extract precise long-range distance restraints from Methyl NOESY spectra using the Full-Matrix-Relaxation analysis (Sounier et al. submitted).
The program is written in Python and require numarray library. RELOAD work on UNIX/Linux operating system.
The program has been compiled for the following platforms :
The license is free for academic sites
and non commercial use : Download
RELOAD
MODULE2
Residual dipolar coupling
and residual chemical shift analysis software
Patrice Dosset and Martin Blackledge
Institut de Biologie Structurale
Grenoble
This development
was funded by the European Union under the EUNMR project as part of the Joint
Research Activity ORIENTING NMR, project number : RII3-026145
Version 2 of the program
MODULE designed to analyze residual dipolar couplings and residual chemical
shifts measured in partially aligned proteins and nucleic acids.
Analysis of
residual anisotropic interactions measured in proteins and nucleic acids
aligned in dilute liquid crystalline media.
Version 2
–
Allows
for the analysis of residual chemical shifts due to non-averaged chemical shift
anisotropy.
–
Allows
for the analysis and comparison of multiple data sets measured for the same
molecule.
–
Allow
for output of fitted data into external files (bug-fix).
–
Allows
for cursor selection of RDC/RCS between peptide units aswell as within peptide
units.
For
residual dipolar coupling based analysis see main manual in download package, or in
On-line Documentation.
The
executable is currently working for Linux machines and some Macintosh
platforms. A more general Macintosh executable will be available shortly.
The
license is free for academic sites and non commercial use : Download Module2
Industrials or commercial users should contact the Development Team ( module@ibs.fr ) to obtain a license .
Please, send comments or bugs reports to : module@ibs.fr